Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7573

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7572: 15940 - Hypothetical Protein, at 595983 to 596534 15940 mRNA_7573: 15941 - KOG0331 ATP-dependent RNA helicase, at 597101 to 600100 15941 mRNA_7574: 15942 - K15275 SLC35B1 solute carrier family 35 (UDP-galactose transporter), member B1, at 600347 to 601742 15942

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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596,365 + 15940 mRNA_7572 0.69 0.8
596,647 + 0.1
596,819 + -0.3
596,990 + 2.5
597,217 - -0.4
597,241 + 2.1
597,650 + 15941 mRNA_7573 0.18 0.8
597,803 - 15941 mRNA_7573 0.23 0.0
597,807 + 15941 mRNA_7573 0.24 -0.2
597,990 - 15941 mRNA_7573 0.30 1.3
597,997 + 15941 mRNA_7573 0.30 0.6
598,289 + 15941 mRNA_7573 0.40 0.4
598,379 - 15941 mRNA_7573 0.43 0.8
598,422 - 15941 mRNA_7573 0.44 0.2
598,833 - 15941 mRNA_7573 0.58 0.9
598,835 - 15941 mRNA_7573 0.58 -0.3
598,835 - 15941 mRNA_7573 0.58 1.9
598,864 + 15941 mRNA_7573 0.59 -0.6
598,896 + 15941 mRNA_7573 0.60 0.5
599,026 - 15941 mRNA_7573 0.64 3.0
599,121 + 15941 mRNA_7573 0.67 0.9
599,168 + 15941 mRNA_7573 0.69 1.7
599,325 + 15941 mRNA_7573 0.74 0.4
599,341 - 15941 mRNA_7573 0.75 0.8
599,543 + 15941 mRNA_7573 0.81 0.8
599,616 + 15941 mRNA_7573 0.84 -0.1
600,095 + -2.3
600,252 - -0.8