Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7521

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482849 to 487263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487379 to 489204 15889

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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486,886 - 1.4
486,895 - 0.7
487,006 + 1.3
487,029 - 1.0
487,043 + -0.6
487,175 + -1.3
487,176 - 0.9
487,336 - 0.8
487,437 - 1.1
487,474 - -1.0
487,476 + -0.1
487,628 + 15889 mRNA_7521 0.14 -0.3
487,642 - 15889 mRNA_7521 0.14 0.9
487,753 + 15889 mRNA_7521 0.20 -0.5
487,758 - 15889 mRNA_7521 0.21 -0.3
487,774 - 15889 mRNA_7521 0.22 -0.3
487,779 + 15889 mRNA_7521 0.22 1.4
488,640 - 15889 mRNA_7521 0.69 0.5
488,641 - 15889 mRNA_7521 0.69 -1.6
488,805 + 15889 mRNA_7521 0.78 0.2
488,805 - 15889 mRNA_7521 0.78 -0.3
488,834 + 15889 mRNA_7521 0.80 -0.6
488,909 - 15889 mRNA_7521 0.84 2.6
489,199 - -1.0
489,218 + 0.8
489,390 - 1.4
489,392 - -2.0
489,396 + 0.8
489,401 + 0.5
489,444 - 2.4
489,447 + 1.8
489,478 - 2.6
489,527 + -0.1
489,532 + 0.5
489,547 - 0.2
489,570 + 0.4
489,570 + 1.0
489,590 - -0.5
489,602 + -0.1
489,615 - 1.2
489,615 - -0.1
489,617 + -0.8
489,618 + 0.5
489,619 + 0.2
489,622 - -1.3
489,625 - 0.2
489,626 - 0.5
489,630 - 0.7
489,631 - 0.1
489,640 - 0.7
489,641 + 0.8
489,642 + -0.1
489,646 + 0.5
489,647 + -1.2
489,653 - -0.4
489,653 - 0.4
489,654 + -0.3
489,660 + 0.7
489,663 + 1.9
489,664 + 0.4
489,664 + 0.7
489,665 - 2.6
489,665 - 0.0
489,666 - 2.8
489,668 - -0.2
489,670 - 0.2
489,673 + -0.5
489,684 + -0.8
489,686 + 1.1
489,805 + 1.6
489,805 - 0.8
489,807 - 0.6
489,808 + -1.7
489,825 - 0.1
489,833 - 2.8
489,836 - -0.1
489,847 - 1.5
489,851 + -0.0
489,936 - -0.3
489,965 - -0.2
489,975 - -0.0
489,985 - 0.1
489,985 + 0.7
489,992 + -0.8
490,001 + 0.1
490,038 + 0.0
490,086 - 0.2
490,104 + -0.1
490,104 + 1.8
490,107 - 3.6
490,113 + 1.0
490,117 - -1.2
490,124 + 0.5
490,128 + 1.9
490,132 + 0.1
490,132 - 1.1
490,140 + 0.0
490,145 - 0.7
490,146 + 2.2
490,152 - -0.1
490,169 + 0.1
490,172 + -1.1
490,180 - 0.7
490,190 - 1.4
490,193 + 0.1