Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7515

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7514: 15882 - K11757 PBRM1, PB1 protein polybromo-1, at 471027 to 473637 15882 mRNA_7515: 15883 - K07827 KRAS, KRAS2 GTPase KRas, at 473987 to 475256 15883 mRNA_7516: 15884 - HMMPfam-Protoglobin-PF11563, at 475785 to 476732 15884

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
473,232 - 15882 mRNA_7514 0.84 1.1
473,232 - 15882 mRNA_7514 0.84 0.0
473,283 - 15882 mRNA_7514 0.86 -0.7
473,371 - 15882 mRNA_7514 0.90 0.7
473,380 + -0.3
473,380 + -2.4
473,402 + 0.2
473,403 + 1.0
473,405 + 0.3
473,663 - 1.3
473,669 + 0.4
473,673 - -0.1
473,679 - 2.1
473,758 + 0.0
473,856 - 0.6
473,907 - 1.0
474,014 + -2.1
474,017 + 0.6
474,151 - 15883 mRNA_7515 0.13 1.8
474,161 + 15883 mRNA_7515 0.14 0.7
474,172 - 15883 mRNA_7515 0.15 0.1
474,420 - 15883 mRNA_7515 0.34 0.5
474,497 + 15883 mRNA_7515 0.40 0.4
474,498 + 15883 mRNA_7515 0.40 0.1
474,590 + 15883 mRNA_7515 0.47 1.1
474,617 - 15883 mRNA_7515 0.50 -1.5
474,632 - 15883 mRNA_7515 0.51 1.5
474,641 + 15883 mRNA_7515 0.51 0.3
474,656 - 15883 mRNA_7515 0.53 0.2
474,678 - 15883 mRNA_7515 0.54 0.5
474,680 - 15883 mRNA_7515 0.55 -0.3
474,693 - 15883 mRNA_7515 0.56 -0.2
474,701 - 15883 mRNA_7515 0.56 -1.2
474,701 + 15883 mRNA_7515 0.56 0.2
474,705 + 15883 mRNA_7515 0.57 0.2
474,716 + 15883 mRNA_7515 0.57 -0.3
474,719 - 15883 mRNA_7515 0.58 -0.1
474,731 + 15883 mRNA_7515 0.59 -0.2
474,788 + 15883 mRNA_7515 0.63 2.7
474,789 - 15883 mRNA_7515 0.63 1.6
474,796 + 15883 mRNA_7515 0.64 1.5
474,796 + 15883 mRNA_7515 0.64 1.1
474,798 + 15883 mRNA_7515 0.64 0.2
474,804 + 15883 mRNA_7515 0.64 1.3
474,818 - 15883 mRNA_7515 0.65 1.1
474,833 + 15883 mRNA_7515 0.67 0.6
474,833 - 15883 mRNA_7515 0.67 0.5
474,844 - 15883 mRNA_7515 0.67 2.7
474,849 + 15883 mRNA_7515 0.68 0.4
474,862 - 15883 mRNA_7515 0.69 1.9
474,872 - 15883 mRNA_7515 0.70 -0.4
474,876 - 15883 mRNA_7515 0.70 -1.7
474,897 - 15883 mRNA_7515 0.72 0.8
474,903 + 15883 mRNA_7515 0.72 -0.0
474,905 + 15883 mRNA_7515 0.72 1.2
474,927 + 15883 mRNA_7515 0.74 0.4
474,928 + 15883 mRNA_7515 0.74 -0.2
474,937 - 15883 mRNA_7515 0.75 0.1
474,949 - 15883 mRNA_7515 0.76 1.3
474,981 + 15883 mRNA_7515 0.78 0.1
475,001 - 15883 mRNA_7515 0.80 0.2
475,009 - 15883 mRNA_7515 0.80 0.7
475,027 + 15883 mRNA_7515 0.82 0.1
475,033 - 15883 mRNA_7515 0.82 0.6
475,043 + 15883 mRNA_7515 0.83 -2.8
475,063 - 15883 mRNA_7515 0.85 0.4
475,064 + 15883 mRNA_7515 0.85 -0.0
475,066 + 15883 mRNA_7515 0.85 0.4
475,225 - 0.4
475,314 + -0.8
475,317 - 1.2
475,330 - 0.4
475,336 + 0.8
475,338 + -0.1
475,340 + 0.1
475,365 - -0.6
475,490 - 0.2
475,494 - 1.3
475,513 + 0.2
475,549 + 3.2
475,647 - 0.7
475,651 - 1.6
475,664 - 0.7
475,672 - 1.4
475,682 - 0.4
475,686 + -0.2
475,820 - -0.3
475,959 - 15884 mRNA_7516 0.18 0.0