Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7506

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7505: 15873 - KOG3292 Predicted membrane protein, at 451426 to 452379 15873 mRNA_7506: 15874 - K15102 SLC25A3, PHC, PIC solute carrier family 25 (mitochondrial phosphate transporter), member 3, at 452663 to 454398 15874 mRNA_7507: 15875 - K17987 NBR1 next to BRCA1 gene 1 protein, at 454869 to 457717 15875

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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451,849 + 15873 mRNA_7505 0.44 0.3
452,393 - 1.3
452,406 - 1.0
452,410 + 1.7
452,503 - -0.1
452,520 - 1.5
452,546 - 2.7
452,547 - 1.8
452,557 - 0.7
452,569 - 1.8
452,570 + 0.6
452,590 + 0.7
452,590 + -0.8
452,593 + 2.0
452,596 - -0.3
452,597 - 0.9
452,694 - 1.2
452,758 + 1.1
452,766 + 0.0
452,875 + 15874 mRNA_7506 0.12 2.0
452,894 - 15874 mRNA_7506 0.13 -0.4
452,895 - 15874 mRNA_7506 0.13 0.3
453,312 - 15874 mRNA_7506 0.37 0.6
453,616 - 15874 mRNA_7506 0.55 0.1
454,035 - 15874 mRNA_7506 0.79 0.9
454,039 - 15874 mRNA_7506 0.79 -0.3
454,041 - 15874 mRNA_7506 0.79 1.7
454,422 - 0.1
454,440 - 0.9
454,511 + 0.3
454,525 + 0.8
454,528 - 0.9
454,536 + 0.3
454,537 + 0.0
454,665 + -0.5
454,670 + 2.0
454,679 - 1.5
454,842 + -1.9
455,095 - -0.0
455,374 - 15875 mRNA_7507 0.18 -0.7