Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7477

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7476: 15844 - K07243 FTR, FTH1, efeU high-affinity iron transporter, at 378155 to 380112 15844 mRNA_7477: 15845 - K07243 FTR, FTH1, efeU high-affinity iron transporter, at 380479 to 382307 15845 mRNA_7478: 15846 - Hypothetical Protein, at 382554 to 382817 15846 mRNA_7479: 15847 - Hypothetical Protein, at 383023 to 384509 15847

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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379,787 - 15844 mRNA_7476 0.83 -1.8
380,000 + -1.6
380,087 + -0.3
380,093 - 0.6
380,119 + -2.4
380,140 - -0.4
380,234 + 3.7
380,235 - 0.4
380,235 + -1.1
380,236 + 0.1
380,356 + -1.3
380,359 + -0.7
380,370 - 1.1
380,384 + 0.5
380,408 - 1.0
380,415 - -0.5
380,420 - 0.0
380,422 - 4.2
380,442 + 0.6
380,546 + 0.5
380,582 - 0.7
380,588 - -0.1
380,589 + -0.7
380,590 + 0.1
380,592 + 2.2
380,601 + 0.2
380,618 + -0.2
380,705 + 15845 mRNA_7477 0.12 -0.7
380,705 - 15845 mRNA_7477 0.12 1.1
380,719 + 15845 mRNA_7477 0.13 0.4
380,724 + 15845 mRNA_7477 0.13 0.3
380,732 - 15845 mRNA_7477 0.14 0.9
380,734 - 15845 mRNA_7477 0.14 -0.1
380,735 - 15845 mRNA_7477 0.14 0.5
380,737 - 15845 mRNA_7477 0.14 0.2
380,740 + 15845 mRNA_7477 0.14 0.0
380,743 + 15845 mRNA_7477 0.14 -2.3
380,746 - 15845 mRNA_7477 0.15 0.1
380,752 + 15845 mRNA_7477 0.15 -0.7
380,756 + 15845 mRNA_7477 0.15 -1.8
380,758 + 15845 mRNA_7477 0.15 0.8
380,759 + 15845 mRNA_7477 0.15 0.2
380,769 - 15845 mRNA_7477 0.16 -0.7
380,881 + 15845 mRNA_7477 0.22 -1.5
380,884 + 15845 mRNA_7477 0.22 0.4
380,889 - 15845 mRNA_7477 0.22 0.8
380,912 - 15845 mRNA_7477 0.24 -0.7
381,022 - 15845 mRNA_7477 0.30 0.3
381,187 - 15845 mRNA_7477 0.39 1.5
381,292 - 15845 mRNA_7477 0.44 -0.1
381,323 - 15845 mRNA_7477 0.46 0.3
381,327 + 15845 mRNA_7477 0.46 -2.9
381,475 + 15845 mRNA_7477 0.54 2.1
381,909 - 15845 mRNA_7477 0.78 0.5
382,347 - 0.6
382,347 + 0.4
382,352 - 1.5
382,464 - 0.8
382,623 + 15846 mRNA_7478 0.26 -0.1
382,624 - 15846 mRNA_7478 0.27 1.1
382,653 + 15846 mRNA_7478 0.38 0.0
382,655 + 15846 mRNA_7478 0.38 0.9
382,934 + -1.4
382,937 - -0.5
382,937 + -0.4
383,256 + 15847 mRNA_7479 0.16 -2.5
383,256 + 15847 mRNA_7479 0.16 0.1