Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7467

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7466: 15834 - K17887 SNX25, MDM1 sorting nexin-25, at 345181 to 349645 15834 mRNA_7467: 15835 - Hypothetical Protein, at 349793 to 351109 15835 mRNA_7468: 15836 - Hypothetical Protein, at 351460 to 352308 15836

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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349,006 + 15834 mRNA_7466 0.86 2.3
349,279 + 0.7
349,279 + 2.0
349,293 + -0.0
349,391 + 1.3
349,409 + -1.1
349,439 - 0.9
349,449 + -1.2
349,569 - 1.6
349,571 - -1.3
349,579 - -0.2
349,579 - 1.1
349,582 - 0.4
349,725 + -0.3
349,744 + -1.6
349,749 + 2.2
349,904 - -0.9
350,015 - 15835 mRNA_7467 0.17 0.4
350,022 - 15835 mRNA_7467 0.17 -0.6
350,027 + 15835 mRNA_7467 0.18 1.2
350,136 + 15835 mRNA_7467 0.26 0.5
350,315 - 15835 mRNA_7467 0.40 0.2
350,320 + 15835 mRNA_7467 0.40 0.2
350,324 - 15835 mRNA_7467 0.40 -0.0
350,337 - 15835 mRNA_7467 0.41 0.9
350,486 - 15835 mRNA_7467 0.53 -1.1
350,587 - 15835 mRNA_7467 0.60 0.9
350,617 + 15835 mRNA_7467 0.63 -0.6
350,778 - 15835 mRNA_7467 0.75 0.4
351,054 + 2.3
351,104 + -0.1
351,199 - -2.1
351,211 + 0.8
351,327 - -1.6
351,476 - -0.5
351,488 + 0.1
351,630 - 15836 mRNA_7468 0.20 2.1
351,736 + 15836 mRNA_7468 0.33 0.2
351,781 - 15836 mRNA_7468 0.38 1.6
351,797 - 15836 mRNA_7468 0.40 1.4
351,913 + 15836 mRNA_7468 0.53 1.2
352,028 - 15836 mRNA_7468 0.67 -0.1