Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7446

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7445: 15813 - Hypothetical Protein, at 294010 to 294708 15813 mRNA_7446: 15814 - K14085 ALDH7A1 aldehyde dehydrogenase family 7 member A1, at 295299 to 297030 15814 mRNA_7447: 15815 - HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995, at 297396 to 299306 15815

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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294,426 - 15813 mRNA_7445 0.60 1.8
294,556 - 15813 mRNA_7445 0.78 2.3
294,578 + 15813 mRNA_7445 0.81 1.1
294,603 - 15813 mRNA_7445 0.85 -0.3
294,606 - 15813 mRNA_7445 0.85 0.3
294,632 + 15813 mRNA_7445 0.89 0.4
294,726 - 0.1
294,743 + 1.7
294,745 + 0.6
294,885 - 0.8
294,886 - -0.7
294,890 - -0.9
294,891 - 0.5
294,892 - 0.5
294,892 + -1.4
294,892 - -1.8
294,893 + -0.3
294,898 - -0.7
294,900 + -0.4
294,901 - 1.5
294,902 - -0.4
294,905 + 2.5
294,906 - 1.9
294,916 - -0.2
294,922 + 0.8
294,927 - -0.5
294,928 - 0.2
294,933 + -0.0
294,935 + -0.0
294,955 + 1.4
294,959 + 0.9
294,969 + 1.6
294,969 - 0.2
294,983 + -0.2
294,985 - 0.5
295,189 - 1.0
295,238 - 1.3
295,257 + -0.3
295,260 + 0.2
295,266 + 0.2
295,275 + 1.9
295,371 + 0.1
295,399 - 0.6
295,414 + -1.9
295,422 - -1.1
295,693 + 15814 mRNA_7446 0.23 0.3
295,890 + 15814 mRNA_7446 0.34 -0.4
296,495 - 15814 mRNA_7446 0.69 1.2
296,887 + 0.8
297,014 + 0.1
297,019 + 0.1
297,039 - -0.4
297,163 - -0.0
297,320 - -0.5
297,338 + -1.6
297,342 + 1.7
297,349 + -0.5
297,356 + 1.0
297,357 + 1.2
297,473 + 1.3
297,491 + -0.4
297,510 + 0.2
297,765 + 15815 mRNA_7447 0.19 0.1