Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7440

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7439: 15807 - K20989 DUR3 urea-proton symporter, at 281348 to 284451 15807 mRNA_7440: 15808 - KOG0537 Cytochrome b5, at 284692 to 285285 15808

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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283,749 + 15807 mRNA_7439 0.77 2.5
283,891 - 15807 mRNA_7439 0.82 1.2
283,926 - 15807 mRNA_7439 0.83 0.7
284,024 + 15807 mRNA_7439 0.86 0.4
284,195 + 0.1
284,355 - -0.3
284,588 + 0.6
284,618 - 1.3
284,646 + -0.2
284,779 + 15808 mRNA_7440 0.15 1.8
284,909 - 15808 mRNA_7440 0.37 1.6
285,022 + 15808 mRNA_7440 0.56 -1.0
285,047 + 15808 mRNA_7440 0.60 -1.1
285,059 + 15808 mRNA_7440 0.62 -1.1
285,127 - 15808 mRNA_7440 0.73 0.5
285,188 + 15808 mRNA_7440 0.84 1.2
285,197 - 15808 mRNA_7440 0.85 1.2
285,210 + 15808 mRNA_7440 0.87 0.0
285,221 - 15808 mRNA_7440 0.89 0.9
285,230 + 0.7
285,348 - 0.1
285,354 + -0.9
285,357 - 0.2
285,357 - 1.3
285,358 - -0.8
285,367 + -0.3
285,376 + 0.0
285,385 + 0.5
285,388 + 0.9
285,400 - -0.1
285,532 + 1.3
285,717 - 1.2