Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7426

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232 15793 mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794 mRNA_7427: 15795 - SUPERFAMILY--SSF51197, at 248497 to 250090 15795

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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245,812 + 15793 mRNA_7425 0.37 0.6
245,813 - 15793 mRNA_7425 0.37 -0.3
246,267 + -1.7
246,270 + 0.6
246,282 + -0.4
246,427 + 1.1
246,428 + -0.0
246,550 + 0.6
246,720 + -0.6
246,830 + 1.3
246,861 + 15794 mRNA_7426 0.10 0.4
246,884 - 15794 mRNA_7426 0.13 2.4
246,902 + 15794 mRNA_7426 0.15 0.4
247,012 + 15794 mRNA_7426 0.26 0.0
247,021 - 15794 mRNA_7426 0.27 -1.7
247,207 + 15794 mRNA_7426 0.46 1.3
247,328 + 15794 mRNA_7426 0.59 2.1
247,329 + 15794 mRNA_7426 0.59 1.8
247,332 - 15794 mRNA_7426 0.59 0.3
247,334 - 15794 mRNA_7426 0.60 0.3
247,347 - 15794 mRNA_7426 0.61 -0.4
247,379 - 15794 mRNA_7426 0.64 1.1
247,383 - 15794 mRNA_7426 0.65 -0.2
247,390 + 15794 mRNA_7426 0.65 0.8
247,397 - 15794 mRNA_7426 0.66 1.7
247,398 + 15794 mRNA_7426 0.66 0.8
247,403 - 15794 mRNA_7426 0.67 -0.5
247,406 - 15794 mRNA_7426 0.67 -0.5
247,413 + 15794 mRNA_7426 0.68 -0.4
247,416 - 15794 mRNA_7426 0.68 -1.1
247,425 + 15794 mRNA_7426 0.69 1.9
247,426 - 15794 mRNA_7426 0.69 1.7
247,427 + 15794 mRNA_7426 0.69 0.1
247,434 - 15794 mRNA_7426 0.70 -0.1
247,442 - 15794 mRNA_7426 0.71 1.2
247,539 - 15794 mRNA_7426 0.81 1.0
247,622 + 15794 mRNA_7426 0.90 -0.3
247,624 - 15794 mRNA_7426 0.90 0.4
247,635 - -0.4
247,635 - -0.4
247,638 - -1.0
247,649 - 0.9
247,653 + 3.3
247,714 - 0.0
247,724 - 0.2
247,727 - -0.2
247,738 - 1.6
247,739 - 1.4
247,749 + 1.0
247,750 - 1.1
247,750 + 1.4
247,753 + -0.1
247,756 + 0.2
247,757 + 2.4
247,762 - -0.2
247,766 - 0.5
247,767 + 0.4
247,781 + 4.4
247,792 - 1.4
247,793 + 2.7
247,794 + 0.2
247,796 + -1.0
247,799 - 0.2
247,800 + -0.0
247,826 - -1.5
247,833 + 1.6
247,846 + -0.0
247,860 + 1.8
247,865 + 0.7
247,866 - 0.8
247,871 + 1.1
247,884 + 0.3
247,885 - -0.5
247,887 + -1.5
247,888 - 1.6
247,889 - -0.4
247,892 + 1.4
247,892 - 1.1
247,895 + -0.0
247,898 - -0.6
247,919 + 1.7
247,925 + 0.9
247,925 + -0.6
247,927 + -0.5
247,935 + 0.7
247,935 - 0.6
247,935 + 0.4
247,936 - 1.3
247,936 - 1.0
247,965 + 0.4
247,982 - 2.0
247,995 + 2.5
247,996 - 2.0
248,053 - 0.1
248,055 + -0.1
248,059 - 0.1
248,065 - 3.4
248,067 + 0.2
248,072 + 0.0
248,081 - -0.9
248,082 - -0.4
248,083 - 0.8
248,086 + 2.5
248,087 - 0.5
248,128 + 2.1
248,151 - 0.2
248,173 - 0.5
248,187 - 0.6
248,193 - -0.6
248,198 + -0.7
248,210 + 1.5
248,221 - -1.6
248,232 + -0.0
248,346 + -1.3
248,393 - -0.4