Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7425

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241820 to 244654 15791 mRNA_7424: 15792 - Hypothetical Protein, at 245039 to 245546 15792 mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232 15793 mRNA_7426: 15794 - Hypothetical Protein, at 246763 to 247720 15794

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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244,574 + 0.2
244,588 - 1.3
244,601 - -1.3
244,616 + 2.3
244,619 - 1.1
244,637 - -0.9
244,669 + 0.2
244,687 + 2.5
244,792 - 0.9
244,793 - 0.3
244,794 + -0.2
244,807 + 1.7
244,811 - 0.2
244,833 - 1.8
244,949 + 0.1
244,951 - -0.5
244,959 + 0.9
244,959 - -1.8
245,229 + 15792 mRNA_7424 0.37 2.5
245,398 - 15792 mRNA_7424 0.71 0.8
245,711 + 15793 mRNA_7425 0.22 0.2
245,812 + 15793 mRNA_7425 0.37 0.6
245,813 - 15793 mRNA_7425 0.37 -0.3
246,267 + -1.7
246,270 + 0.6
246,282 + -0.4
246,427 + 1.1
246,428 + -0.0
246,550 + 0.6
246,720 + -0.6
246,830 + 1.3
246,861 + 15794 mRNA_7426 0.10 0.4
246,884 - 15794 mRNA_7426 0.13 2.4
246,902 + 15794 mRNA_7426 0.15 0.4
247,012 + 15794 mRNA_7426 0.26 0.0
247,021 - 15794 mRNA_7426 0.27 -1.7
247,207 + 15794 mRNA_7426 0.46 1.3