Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7404

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7403: 15771 - Hypothetical Protein, at 196624 to 197387 15771 mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197596 to 198665 15772 mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198877 to 199727 15773

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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197,412 + 0.6
197,718 + 15772 mRNA_7404 0.11 2.0
197,996 + 15772 mRNA_7404 0.37 -0.4
198,180 - 15772 mRNA_7404 0.55 0.7
198,280 + 15772 mRNA_7404 0.64 0.7
198,421 - 15772 mRNA_7404 0.77 1.2
198,450 + 15772 mRNA_7404 0.80 1.6
198,577 - 1.0
198,579 + 0.1
198,596 - 0.1
198,604 - -1.5
198,721 - 0.6
198,759 + 0.1
198,760 - 1.4
199,041 + 15773 mRNA_7405 0.19 -1.7