Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7386

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7385: 15753 - ProSiteProfiles-Ubiquitin-interacting motif (UIM) repeat profile.-PS50330, at 154422 to 157963 15753 mRNA_7386: 15754 - HMMPfam-F-box-like-PF12937, at 158123 to 159294 15754 mRNA_7387: 15755 - Hypothetical Protein, at 159588 to 160374 15755

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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157,199 + 15753 mRNA_7385 0.78 0.3
157,295 - 15753 mRNA_7385 0.81 0.8
157,296 + 15753 mRNA_7385 0.81 0.8
157,487 + 15753 mRNA_7385 0.87 1.3
157,652 + 1.7
157,742 - 2.2
157,862 - 1.7
158,223 - -0.3
158,329 + 15754 mRNA_7386 0.18 -0.8
158,333 - 15754 mRNA_7386 0.18 2.3
158,399 - 15754 mRNA_7386 0.24 1.0
158,492 + 15754 mRNA_7386 0.31 0.6
158,496 - 15754 mRNA_7386 0.32 -1.1
158,508 + 15754 mRNA_7386 0.33 0.8
159,659 + 0.3
159,699 - 15755 mRNA_7387 0.14 0.7
159,932 - 15755 mRNA_7387 0.44 1.0