Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7382

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7381: 15749 - K03128 TAF2 transcription initiation factor TFIID subunit 2, at 141230 to 147514 15749 mRNA_7382: 15750 - Hypothetical Protein, at 147562 to 148955 15750 mRNA_7383: 15751 - K19355 MAN mannan endo-1,4-beta-mannosidase, at 149650 to 152306 15751

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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147,116 + -0.4
147,306 + 0.3
147,309 - 1.1
147,315 + 0.5
147,895 - 15750 mRNA_7382 0.24 1.3
148,023 + 15750 mRNA_7382 0.33 1.2
148,063 + 15750 mRNA_7382 0.36 0.7
148,169 + 15750 mRNA_7382 0.44 0.5
148,326 + 15750 mRNA_7382 0.55 -0.0
148,341 + 15750 mRNA_7382 0.56 -1.1
148,396 + 15750 mRNA_7382 0.60 0.3
148,441 + 15750 mRNA_7382 0.63 0.4
148,483 - 15750 mRNA_7382 0.66 -0.1
148,587 - 15750 mRNA_7382 0.74 1.2
148,635 - 15750 mRNA_7382 0.77 -1.1
148,636 - 15750 mRNA_7382 0.77 0.4
148,784 + 15750 mRNA_7382 0.88 0.1
148,784 + 15750 mRNA_7382 0.88 -1.1
148,808 - 15750 mRNA_7382 0.89 1.0
148,897 - 0.2
148,908 + -0.5
148,909 + 0.8
148,912 - 0.5
148,918 + 0.8
148,919 - 0.0
148,940 + -2.0
148,974 - -0.3
149,004 + 0.9
149,012 - -0.5
149,023 + -0.1
149,031 + -0.8
149,205 + -0.3
149,241 - 1.7
149,248 - -0.1
149,275 + -0.1
149,353 + -0.6
149,359 + -0.0
149,377 + 0.5
149,389 + 0.1
149,546 + 0.1
149,649 - 0.5
149,652 - -0.4
149,652 - -0.4
149,653 + -0.7
149,655 + -0.8