Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7365

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7364: 15732 - KOG1337 N-methyltransferase, at 98801 to 102847 15732 mRNA_7365: 15733 - Hypothetical Protein, at 102943 to 104194 15733 mRNA_7366: 15734 - SUPERFAMILY--SSF57701, at 104446 to 105512 15734

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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102,148 + 15732 mRNA_7364 0.83 -0.7
102,238 + 15732 mRNA_7364 0.85 0.4
102,400 - 15732 mRNA_7364 0.89 0.2
102,555 + -0.5
102,650 + 2.0
102,677 + -0.5
102,832 + 0.5
102,834 + 0.2
102,961 - 0.3
102,975 + 0.9
103,130 + 15733 mRNA_7365 0.15 -1.9
103,263 + 15733 mRNA_7365 0.26 1.1
103,447 - 15733 mRNA_7365 0.40 0.6
103,574 - 15733 mRNA_7365 0.50 1.1
103,580 + 15733 mRNA_7365 0.51 -0.6
103,858 + 15733 mRNA_7365 0.73 1.4
104,182 + -0.1
104,346 + 0.9
104,461 - 1.0
104,583 + 15734 mRNA_7366 0.13 0.9
104,749 + 15734 mRNA_7366 0.28 -0.9
104,875 - 15734 mRNA_7366 0.40 -1.9
104,968 + 15734 mRNA_7366 0.49 0.1
105,039 + 15734 mRNA_7366 0.56 0.1
105,136 - 15734 mRNA_7366 0.65 -0.8
105,190 - 15734 mRNA_7366 0.70 3.0
105,193 + 15734 mRNA_7366 0.70 0.4