Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7357

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7356: 15724 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 80898 to 81821 15724 mRNA_7357: 15725 - Hypothetical Protein, at 82234 to 84306 15725 mRNA_7358: 15726 - Hypothetical Protein, at 84759 to 87914 15726

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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81,268 - 15724 mRNA_7356 0.40 0.8
81,277 - 15724 mRNA_7356 0.41 -0.2
81,579 - 15724 mRNA_7356 0.74 -0.1
81,880 - 0.5
81,963 + -2.6
81,979 + -0.4
82,026 + 0.5
82,171 + 1.1
82,315 + 2.0
82,633 + 15725 mRNA_7357 0.19 -0.5
82,795 - 15725 mRNA_7357 0.27 1.2
83,005 - 15725 mRNA_7357 0.37 0.8
83,021 + 15725 mRNA_7357 0.38 -1.6
83,044 + 15725 mRNA_7357 0.39 -0.1
83,167 - 15725 mRNA_7357 0.45 1.0
83,704 - 15725 mRNA_7357 0.71 0.5
83,742 - 15725 mRNA_7357 0.73 -0.9
83,746 + 15725 mRNA_7357 0.73 -0.4
83,878 + 15725 mRNA_7357 0.79 1.1
84,034 + 15725 mRNA_7357 0.87 0.1
84,034 + 15725 mRNA_7357 0.87 0.3
84,039 + 15725 mRNA_7357 0.87 -0.9
84,135 - 0.7
84,282 + 0.0
84,445 - -0.2
84,460 - -0.0
84,467 + 0.5
84,853 + -1.2
84,856 - 0.1