Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7356

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7355: 15723 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 79424 to 80346 15723 mRNA_7356: 15724 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 80898 to 81821 15724 mRNA_7357: 15725 - Hypothetical Protein, at 82234 to 84306 15725

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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80,002 - 15723 mRNA_7355 0.63 -0.6
80,292 - -2.0
80,293 + 2.1
80,394 - 0.7
80,501 - -0.5
80,501 - -1.5
80,501 - 0.6
80,501 - 0.3
80,512 + -0.6
80,563 + 1.3
80,693 - 2.9
80,702 - 0.1
80,724 - -1.2
81,121 - 15724 mRNA_7356 0.24 1.1
81,268 - 15724 mRNA_7356 0.40 0.8
81,277 - 15724 mRNA_7356 0.41 -0.2
81,579 - 15724 mRNA_7356 0.74 -0.1
81,880 - 0.5
81,963 + -2.6
81,979 + -0.4
82,026 + 0.5
82,171 + 1.1
82,315 + 2.0
82,633 + 15725 mRNA_7357 0.19 -0.5
82,795 - 15725 mRNA_7357 0.27 1.2