Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7328

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7327: 15695 - KOG2883 NIPSNAP1 protein, at 15080 to 16504 15695 mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16802 to 18584 15696

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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16,260 - 15695 mRNA_7327 0.83 0.8
16,270 - 15695 mRNA_7327 0.84 1.2
16,314 + 15695 mRNA_7327 0.87 0.2
16,588 + 0.2
16,598 + -0.6
16,769 - 0.9
16,797 + 0.6
17,098 - 15696 mRNA_7328 0.17 0.0
17,165 + 15696 mRNA_7328 0.20 0.8
17,318 + 15696 mRNA_7328 0.29 -1.8
17,592 + 15696 mRNA_7328 0.44 0.8
17,597 - 15696 mRNA_7328 0.45 3.5
17,708 + 15696 mRNA_7328 0.51 1.3
17,731 - 15696 mRNA_7328 0.52 -1.8
17,895 - 15696 mRNA_7328 0.61 0.8
18,001 + 15696 mRNA_7328 0.67 -2.1
18,174 - 15696 mRNA_7328 0.77 -0.2
18,187 + 15696 mRNA_7328 0.78 0.7
18,193 + 15696 mRNA_7328 0.78 -0.4
18,195 + 15696 mRNA_7328 0.78 -0.3
18,290 - 15696 mRNA_7328 0.83 3.1
18,345 + 15696 mRNA_7328 0.87 0.4
18,433 - 1.2
18,488 + 1.2
18,600 - 1.2
18,618 - 0.8
18,813 + -1.6
19,048 - -0.2
19,062 - 1.3
19,122 + 0.4
19,182 - 3.7
19,219 - -0.2
19,227 + 0.1
19,227 + 1.6
19,228 - -0.0
19,336 - 0.0
19,338 - -1.0
19,343 + -1.2
19,356 - 0.5
19,369 - 0.0
19,503 + -0.3