Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7307

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7306: 15674 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 1356547 to 1358907 15674 mRNA_7307: 15675 - Hypothetical Protein, at 1359048 to 1360624 15675 mRNA_7308: 15676 - Hypothetical Protein, at 1360588 to 1362752 15676

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,358,106 + 15674 mRNA_7306 0.66 1.8
1,358,232 - 15674 mRNA_7306 0.71 0.9
1,358,526 - 15674 mRNA_7306 0.84 0.5
1,358,644 + 15674 mRNA_7306 0.89 -1.0
1,358,682 - 0.3
1,358,837 + -1.4
1,358,842 - 0.3
1,358,844 + -0.3
1,358,970 - 3.6
1,358,975 - -0.8
1,359,193 - -1.2
1,359,194 + 1.1
1,359,287 + 15675 mRNA_7307 0.15 -0.1
1,359,853 - 15675 mRNA_7307 0.51 -0.0
1,359,995 - 15675 mRNA_7307 0.60 1.0
1,360,101 + 15675 mRNA_7307 0.67 -0.3
1,360,153 + 15675 mRNA_7307 0.70 -1.7
1,360,280 + 15675 mRNA_7307 0.78 -3.6
1,360,424 + 15675 mRNA_7307 0.87 -3.5
1,360,425 + 15675 mRNA_7307 0.87 -1.9
1,360,548 - -0.1
1,360,613 + 1.3
1,360,650 + 0.5
1,360,694 - -1.1
1,360,967 - 15676 mRNA_7308 0.18 0.2
1,361,109 + 15676 mRNA_7308 0.24 0.1
1,361,190 - 15676 mRNA_7308 0.28 -0.1
1,361,433 + 15676 mRNA_7308 0.39 0.2