Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7285

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7284: 15652 - KOG0537 Cytochrome b5, at 1295537 to 1296172 15652 mRNA_7285: 15653 - HMMPfam-GPR1/FUN34/yaaH family-PF01184,ProSitePatterns-GPR1/FUN34/yaaH family signature.-PS01114, at 1296567 to 1298156 15653 mRNA_7286: 15654 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 1298455 to 1300194 15654

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,295,648 + 15652 mRNA_7284 0.17 0.1
1,296,067 + 15652 mRNA_7284 0.83 1.0
1,296,068 - 15652 mRNA_7284 0.83 0.9
1,296,082 - 15652 mRNA_7284 0.86 1.1
1,296,236 - -0.2
1,296,246 + 0.2
1,296,287 + -0.2
1,296,359 + -0.2
1,296,387 + -1.2
1,296,994 + 15653 mRNA_7285 0.27 0.2
1,297,233 - 15653 mRNA_7285 0.42 0.0
1,297,553 - 15653 mRNA_7285 0.62 0.2
1,297,829 - 15653 mRNA_7285 0.79 2.5
1,297,837 - 15653 mRNA_7285 0.80 0.3
1,297,882 - 15653 mRNA_7285 0.83 0.3
1,298,142 - -1.6
1,298,168 - -0.5
1,298,178 - 0.4
1,298,760 + 15654 mRNA_7286 0.18 0.7
1,298,891 - 15654 mRNA_7286 0.25 -0.9