Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7261

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7261: 15629 - SUPERFAMILY--SSF51735, at 1246601 to 1248053 15629 mRNA_7262: 15630 - HMMPfam-Peptidase M50B-like-PF13398, at 1248701 to 1250915 15630

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,245,796 - 1.5
1,245,909 - 2.1
1,245,909 - 0.6
1,245,928 + 0.5
1,246,064 - -1.2
1,246,236 + 0.4
1,246,242 + 0.1
1,246,250 + 0.0
1,246,509 + 0.4
1,246,552 - -0.2
1,246,638 + 1.4
1,246,666 + -0.0
1,246,682 + 1.6
1,246,746 - -0.4
1,246,788 - 15629 mRNA_7261 0.13 1.8
1,246,923 + 15629 mRNA_7261 0.22 -0.8
1,246,945 + 15629 mRNA_7261 0.24 2.6
1,246,980 - 15629 mRNA_7261 0.26 -0.2
1,246,986 + 15629 mRNA_7261 0.26 0.7
1,246,989 - 15629 mRNA_7261 0.27 -2.8
1,247,331 - 15629 mRNA_7261 0.50 0.8
1,247,544 - 15629 mRNA_7261 0.65 0.5
1,247,680 + 15629 mRNA_7261 0.74 3.8
1,247,681 + 15629 mRNA_7261 0.74 2.5
1,247,682 - 15629 mRNA_7261 0.74 1.7
1,247,803 - 15629 mRNA_7261 0.83 -1.0
1,247,848 + 15629 mRNA_7261 0.86 -1.0
1,248,100 - 1.5
1,248,105 - 0.2
1,248,111 + 0.2
1,248,120 + -0.3
1,248,121 + 0.0
1,248,122 - 0.5
1,248,123 + -1.6
1,248,128 - 0.1
1,248,130 - 0.1
1,248,130 + -0.2
1,248,130 + -1.8
1,248,139 - 2.7
1,248,150 + 0.4
1,248,152 + -0.1
1,248,152 + -0.8
1,248,161 + -0.9
1,248,418 + 1.5
1,248,421 + 0.4
1,248,438 + -1.2
1,248,439 - 0.7
1,248,454 - 1.4
1,248,720 - 1.5
1,248,720 - -0.6
1,248,851 + -0.1
1,248,921 - 1.4
1,249,027 + 15630 mRNA_7262 0.15 -0.4