Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7256

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7255: 15623 - Hypothetical Protein, at 1227615 to 1231158 15623 mRNA_7256: 15624 - BLAST protein kinase-like domain containing protein [Rh..., at 1231458 to 1233472 15624 mRNA_7257: 15625 - ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 1233566 to 1236513 15625

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,230,715 - 15623 mRNA_7255 0.87 -0.7
1,230,772 - 15623 mRNA_7255 0.89 1.2
1,230,777 + 15623 mRNA_7255 0.89 -1.2
1,230,809 + -0.2
1,230,812 - 0.0
1,230,813 - 1.6
1,230,923 - -1.7
1,230,952 + -2.1
1,231,086 + 1.5
1,231,192 - 3.0
1,231,301 - 1.5
1,231,322 + -0.2
1,231,352 - 0.6
1,231,370 - 0.9
1,231,371 + 0.6
1,231,374 + -0.4
1,231,643 - 1.6
1,231,730 - 15624 mRNA_7256 0.13 3.0
1,231,949 + 15624 mRNA_7256 0.24 0.3
1,231,955 + 15624 mRNA_7256 0.25 0.2
1,232,185 - 15624 mRNA_7256 0.36 -0.0
1,232,401 - 15624 mRNA_7256 0.47 0.0
1,232,655 - 15624 mRNA_7256 0.59 1.9
1,232,939 - 15624 mRNA_7256 0.73 0.5
1,232,957 - 15624 mRNA_7256 0.74 -0.6
1,233,295 - -0.2
1,233,446 - -0.0
1,233,447 - -0.5
1,233,503 - 0.4
1,233,558 + 0.2
1,233,800 + 0.4
1,233,846 - -1.1
1,234,023 + 15625 mRNA_7257 0.16 0.4
1,234,176 - 15625 mRNA_7257 0.21 -0.4
1,234,283 + 15625 mRNA_7257 0.24 3.0
1,234,336 - 15625 mRNA_7257 0.26 -0.1
1,234,407 + 15625 mRNA_7257 0.29 -0.5
1,234,415 - 15625 mRNA_7257 0.29 2.4
1,234,416 + 15625 mRNA_7257 0.29 0.3