Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7238

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7237: 15605 - Hypothetical Protein, at 1193513 to 1195819 15605 mRNA_7238: 15606 - Hypothetical Protein, at 1196302 to 1197931 15606 mRNA_7239: 15607 - Hypothetical Protein, at 1198492 to 1200248 15607

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,195,322 + 15605 mRNA_7237 0.78 1.0
1,196,139 + 0.5
1,196,140 + 0.2
1,196,202 + 0.1
1,196,202 - 3.1
1,196,359 + 0.3
1,196,489 - 15606 mRNA_7238 0.11 -0.3
1,196,621 - 15606 mRNA_7238 0.20 -1.9
1,196,639 - 15606 mRNA_7238 0.21 0.6
1,196,736 + 15606 mRNA_7238 0.27 1.0
1,196,895 + 15606 mRNA_7238 0.36 1.0
1,198,088 - 0.6
1,198,097 + 0.4
1,198,115 + -0.5
1,198,220 - 1.4
1,198,316 + 1.9
1,198,319 - 1.0
1,198,361 + -0.5
1,198,364 + -0.1
1,198,372 - 1.2
1,198,383 - 0.5
1,198,393 + 1.4
1,198,526 + 0.7
1,198,534 - 0.5
1,198,544 + -0.9
1,198,551 - 0.2
1,198,802 + 15607 mRNA_7239 0.18 -0.9
1,198,813 + 15607 mRNA_7239 0.18 0.5
1,198,842 + 15607 mRNA_7239 0.20 0.2
1,198,915 - 15607 mRNA_7239 0.24 0.1