Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7222

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7221: 15589 - K02133 ATPeF1B, ATP5B, ATP2 F-type H+-transporting ATPase subunit beta, at 1163041 to 1165362 15589 mRNA_7222: 15590 - KOG1572 Predicted protein tyrosine phosphatase, at 1165712 to 1166653 15590 mRNA_7223: 15591 - K19983 EXOC1, SEC3 exocyst complex component 1, at 1166927 to 1171458 15591

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,165,385 - -0.6
1,165,522 - 0.0
1,165,572 - -0.0
1,165,692 + -0.0
1,165,708 - 0.2
1,165,825 - 15590 mRNA_7222 0.12 0.9
1,165,860 + 15590 mRNA_7222 0.16 0.4
1,166,001 + 15590 mRNA_7222 0.31 1.3
1,166,087 - 15590 mRNA_7222 0.40 0.2
1,166,259 - 15590 mRNA_7222 0.58 0.8
1,166,579 - 0.4
1,167,200 - 0.7
1,167,321 + -0.4
1,167,626 - 15591 mRNA_7223 0.15 2.7