Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7127

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7126: 15494 - K15122 SLC41A solute carrier family 41, at 939569 to 941230 15494 mRNA_7127: 15495 - BLAST adenylate cyclase-associated protein [Moesziomyces an..., at 941404 to 943862 15495 mRNA_7128: 15496 - K00939 adk, AK adenylate kinase, at 944172 to 945488 15496

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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940,741 - 15494 mRNA_7126 0.71 2.5
940,877 - 15494 mRNA_7126 0.79 2.2
940,891 - 15494 mRNA_7126 0.80 1.8
941,014 - 15494 mRNA_7126 0.87 2.0
941,309 - 3.1
941,327 + -0.3
941,328 + -0.0
941,332 - 0.4
941,460 + -1.1
941,460 + 1.6
941,590 + 1.7
941,595 - 1.4
941,602 - 3.2
941,603 + -0.8
941,612 + -2.5
941,729 - 15495 mRNA_7127 0.13 -1.0
941,736 + 15495 mRNA_7127 0.14 -0.3
941,766 - 15495 mRNA_7127 0.15 -0.2
941,772 + 15495 mRNA_7127 0.15 -0.2
941,775 + 15495 mRNA_7127 0.15 -1.6
942,035 + 15495 mRNA_7127 0.26 0.5
942,049 - 15495 mRNA_7127 0.26 -0.2
942,105 - 15495 mRNA_7127 0.29 0.3
942,179 - 15495 mRNA_7127 0.32 0.7
942,187 - 15495 mRNA_7127 0.32 0.9
942,660 - 15495 mRNA_7127 0.51 0.0
942,932 - 15495 mRNA_7127 0.62 0.7
943,045 - 15495 mRNA_7127 0.67 1.4
943,518 - 15495 mRNA_7127 0.86 0.1
944,148 + 0.5