Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7106

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892209 to 895612 15473 mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895700 to 897201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897416 to 899091 15475

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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894,977 + 15473 mRNA_7105 0.81 3.2
895,002 - 15473 mRNA_7105 0.82 0.6
895,399 - 1.2
895,417 - 0.8
896,016 + 15474 mRNA_7106 0.21 0.8
896,481 - 15474 mRNA_7106 0.52 2.1
896,628 - 15474 mRNA_7106 0.62 1.8
897,104 + -0.3
897,359 - -0.1
897,367 + 0.3
897,376 + 1.7
897,398 - 1.2
897,496 - -1.3
897,641 - 15475 mRNA_7107 0.13 1.7
897,921 - 15475 mRNA_7107 0.30 -0.4