Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7102

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7101: 15469 - K08968 E1.8.4.14 L-methionine (R)-S-oxide reductase, at 881719 to 882426 15469 mRNA_7102: 15470 - K03441 GLP-F aquaglyceroporin related protein, other eukaryote, at 882881 to 885755 15470

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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881,882 - 15469 mRNA_7101 0.23 -1.2
881,896 + 15469 mRNA_7101 0.25 2.7
882,017 + 15469 mRNA_7101 0.42 2.5
882,027 - 15469 mRNA_7101 0.44 -0.3
882,053 - 15469 mRNA_7101 0.47 -1.0
882,114 - 15469 mRNA_7101 0.56 0.5
882,177 - 15469 mRNA_7101 0.65 3.6
882,187 - 15469 mRNA_7101 0.66 0.6
882,189 + 15469 mRNA_7101 0.66 -0.9
882,191 + 15469 mRNA_7101 0.67 0.3
882,192 - 15469 mRNA_7101 0.67 0.5
882,192 - 15469 mRNA_7101 0.67 -0.1
882,209 + 15469 mRNA_7101 0.69 -1.5
882,213 - 15469 mRNA_7101 0.70 0.4
882,219 + 15469 mRNA_7101 0.71 0.4
882,236 + 15469 mRNA_7101 0.73 -0.3
882,380 - 1.0
882,464 - -0.7
882,465 + -0.8
882,472 - 0.3
882,475 - 0.4
882,477 - -0.6
882,485 - -1.5
882,486 - 0.0
882,585 + 2.4
882,648 - 0.3
882,655 - 0.4
882,787 - 1.3
882,790 - -1.6
883,060 - 0.7
883,514 + 15470 mRNA_7102 0.22 0.4
884,246 + 15470 mRNA_7102 0.47 -0.2
884,402 - 15470 mRNA_7102 0.53 0.2
884,443 + 15470 mRNA_7102 0.54 0.5
884,998 - 15470 mRNA_7102 0.74 -0.6
885,194 + 15470 mRNA_7102 0.80 -0.1
885,285 + 15470 mRNA_7102 0.84 0.8
885,287 + 15470 mRNA_7102 0.84 -1.7
885,438 - 15470 mRNA_7102 0.89 0.9
885,574 + -0.1
885,699 - -0.3
885,706 - -0.2
885,720 + 0.4
886,027 - 0.9
886,487 + -0.8
886,641 + 2.9