Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7095

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7094: 15462 - KOG1667 Zn2+-binding protein Melusin/RAR1, contains CHORD domain, at 870495 to 871178 15462 mRNA_7095: 15463 - Hypothetical Protein, at 871205 to 873737 15463 mRNA_7096: 15464 - K16729 CHORDC1, CHP1 cysteine and histidine-rich domain-containing protein 1, at 874025 to 875519 15464

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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870,251 + 0.2
870,260 - -1.0
870,270 + -0.6
870,270 + 0.7
870,271 + 1.8
870,273 - 0.8
870,281 + -0.5
870,399 + 0.4
870,411 - -1.5
870,425 + 0.8
870,542 + -0.3
870,707 + 15462 mRNA_7094 0.31 0.4
870,866 + 15462 mRNA_7094 0.54 1.3
871,403 - 1.2
871,857 - 15463 mRNA_7095 0.26 0.4
873,506 + 0.6
873,625 - 1.0
873,637 + 1.6
873,776 - 2.3
873,776 - 0.1
873,781 - -1.1
873,793 + 1.4
873,793 + 1.3
873,793 + 0.2
873,794 - 1.2
873,795 + -1.3
873,795 - -1.4
873,809 - -0.1
873,935 - 1.7
874,093 - 0.7
874,640 + 15464 mRNA_7096 0.41 3.7