Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7092

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7091: 15459 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 859673 to 862971 15459 mRNA_7092: 15460 - KOG2545 Conserved membrane protein, at 863308 to 866540 15460 mRNA_7093: 15461 - K16073 ALR, MNR magnesium transporter, at 866899 to 868705 15461

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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862,356 - 15459 mRNA_7091 0.81 0.9
862,787 + 2.5
862,813 - 1.5
862,831 - -0.2
862,848 - 1.3
862,975 + 0.4
863,009 + -0.1
863,175 - -1.9
864,048 + 15460 mRNA_7092 0.23 -0.1
864,049 + 15460 mRNA_7092 0.23 0.5
864,049 - 15460 mRNA_7092 0.23 1.6
864,057 + 15460 mRNA_7092 0.23 -3.3
864,223 + 15460 mRNA_7092 0.28 0.4
864,341 + 15460 mRNA_7092 0.32 0.9
864,377 - 15460 mRNA_7092 0.33 -0.0
864,532 + 15460 mRNA_7092 0.38 2.5
864,810 - 15460 mRNA_7092 0.46 -1.2
864,838 + 15460 mRNA_7092 0.47 1.4
865,100 - 15460 mRNA_7092 0.55 1.8
865,259 + 15460 mRNA_7092 0.60 0.6
865,404 + 15460 mRNA_7092 0.65 1.9
865,425 + 15460 mRNA_7092 0.65 -1.4
865,554 - 15460 mRNA_7092 0.69 -0.7
866,121 - 15460 mRNA_7092 0.87 -0.6
866,301 + 0.2
866,428 - -0.1
866,428 + 0.5
866,438 + 1.6
866,440 + 0.4
866,444 + 0.6
866,497 + -1.4
866,574 - 1.7
866,584 - 0.9
866,590 - 2.0
866,594 + -0.2
866,598 - 0.5
866,609 - 0.3
866,614 + -0.1
866,621 + -0.3