Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7086

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7085: 15453 - HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689, at 843971 to 847409 15453 mRNA_7086: 15454 - HMMPfam-Shugoshin C terminus-PF07557, at 847556 to 851531 15454 mRNA_7087: 15455 - Hypothetical Protein, at 851570 to 853119 15455

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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847,056 + 15453 mRNA_7085 0.90 2.7
847,462 - -0.8
847,480 - 1.9
847,519 + -1.3
847,789 - -0.2
848,099 + 15454 mRNA_7086 0.14 1.3
848,413 + 15454 mRNA_7086 0.22 -0.2
848,713 - 15454 mRNA_7086 0.29 1.3
849,114 + 15454 mRNA_7086 0.39 -2.6
849,124 + 15454 mRNA_7086 0.39 0.5
850,056 - 15454 mRNA_7086 0.63 2.4
850,217 + 15454 mRNA_7086 0.67 0.4
850,241 - 15454 mRNA_7086 0.68 0.4
850,279 + 15454 mRNA_7086 0.68 1.2
850,387 - 15454 mRNA_7086 0.71 -1.3
850,413 - 15454 mRNA_7086 0.72 -1.4
850,415 + 15454 mRNA_7086 0.72 1.8
850,558 + 15454 mRNA_7086 0.76 -0.1
850,666 - 15454 mRNA_7086 0.78 0.4
850,729 + 15454 mRNA_7086 0.80 1.0
850,861 - 15454 mRNA_7086 0.83 2.3
850,885 - 15454 mRNA_7086 0.84 1.0
851,294 + 2.6
851,451 + 3.0
851,604 + 2.6
851,906 - 15455 mRNA_7087 0.22 -0.3
851,913 + 15455 mRNA_7087 0.22 1.4
852,514 + 15455 mRNA_7087 0.61 0.2
852,514 + 15455 mRNA_7087 0.61 1.5