Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7057

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7056: 15424 - K01557 FAHD1 acylpyruvate hydrolase, at 776372 to 777538 15424 mRNA_7057: 15425 - K15634 gpmB probable phosphoglycerate mutase, at 777852 to 778935 15425 mRNA_7058: 15426 - KOG0206 P-type ATPase, at 779457 to 784844 15426

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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777,042 + 15424 mRNA_7056 0.57 0.1
777,050 - 15424 mRNA_7056 0.58 0.6
777,196 + 15424 mRNA_7056 0.71 1.6
777,311 - 15424 mRNA_7056 0.80 1.9
777,608 + -0.4
777,610 + 0.7
777,661 + -0.8
777,769 - 0.2
777,795 + 2.7
777,889 - 0.3
777,918 - -1.4
777,923 + -0.9
778,028 - 15425 mRNA_7057 0.16 2.1
778,039 - 15425 mRNA_7057 0.17 -2.0
778,059 - 15425 mRNA_7057 0.19 0.8
778,068 - 15425 mRNA_7057 0.20 0.4
778,368 - 15425 mRNA_7057 0.48 -0.2
778,393 + 15425 mRNA_7057 0.50 -1.1
778,634 - 15425 mRNA_7057 0.72 0.2
778,825 - 15425 mRNA_7057 0.90 1.1
778,862 + 0.3
778,945 + -0.2
778,965 + 0.2
779,069 - 0.5
779,078 + 1.5
779,089 - 0.6
779,090 - 1.2
779,095 + 0.3
779,110 + 1.6
779,117 - 2.1
779,213 - -1.3
779,219 + -0.8
779,224 + 1.1
779,243 + -0.6
779,252 - -0.8
779,253 + 0.2
779,255 - 1.3
779,256 + 0.5
779,257 + -0.1
779,257 - 1.1
779,305 - 0.2
779,406 + -0.3
779,408 - -0.3
779,432 - -0.4
779,441 + 0.0
779,578 - -1.0
779,851 - 0.1