Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7043

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7042: 15410 - Hypothetical Protein, at 735452 to 736654 15410 mRNA_7043: 15411 - Hypothetical Protein, at 736926 to 740766 15411 mRNA_7044: 15412 - KOG4299 PHD Zn-finger protein, at 740961 to 743698 15412

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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736,084 + 15410 mRNA_7042 0.53 -0.5
736,229 - 15410 mRNA_7042 0.65 -0.5
736,541 + 2.3
736,665 + 1.3
736,788 + -2.1
736,794 - -0.2
736,803 + 0.3
736,806 - -3.1
736,808 - 0.5
736,811 + 0.8
736,812 - -0.6
736,825 - 3.4
736,834 - -0.1
736,834 - 1.5
736,843 + 0.3
736,855 + 2.2
736,855 - 0.9
736,856 - -0.9
736,858 + 1.1
736,898 - 0.0
736,913 + -0.0
736,917 + -1.2
736,930 + -0.2
736,935 - -2.7
736,960 + 1.0
736,964 - -1.4
736,972 + 2.1
736,977 - 0.3
736,980 + -0.6
736,986 + 1.0
736,993 - 0.8
737,001 - 1.4
737,002 + 1.3
737,026 - -0.4
737,031 + -0.0
737,032 - 2.6
737,056 + -1.9
737,069 - 0.7
737,081 + 1.2
737,084 - 0.6
737,098 + -0.1
737,098 - 2.4
737,109 - -1.1
737,119 - 0.2
737,119 + -0.7
737,122 - 1.9
737,128 - 0.4
737,143 - 0.2
737,146 - 2.1
737,156 - -0.1
737,157 - 0.4
737,157 + 0.0
737,161 - -0.2
737,163 - 0.0
737,163 + 1.1
737,166 + -0.8
737,168 + -0.1
737,169 - -0.3
737,171 - -0.1
737,175 + -1.3
737,179 + -0.2
737,183 + -0.4
737,198 + -1.1
737,320 - 15411 mRNA_7043 0.10 -0.5
737,327 + 15411 mRNA_7043 0.10 0.3
737,346 - 15411 mRNA_7043 0.11 -1.3
737,642 + 15411 mRNA_7043 0.19 -0.4
738,037 - 15411 mRNA_7043 0.29 0.3
738,037 - 15411 mRNA_7043 0.29 1.3
738,069 - 15411 mRNA_7043 0.30 2.0
738,120 - 15411 mRNA_7043 0.31 0.2
738,176 + 15411 mRNA_7043 0.33 -0.4
738,307 + 15411 mRNA_7043 0.36 0.6
738,624 + 15411 mRNA_7043 0.44 0.6
738,640 - 15411 mRNA_7043 0.45 2.0
738,933 - 15411 mRNA_7043 0.52 -0.5
739,037 - 15411 mRNA_7043 0.55 -0.8
739,507 + 15411 mRNA_7043 0.67 -0.2
739,703 - 15411 mRNA_7043 0.72 -0.2
740,660 + 1.2
740,866 + 0.6
741,139 - 3.0