Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7029

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7028: 15396 - SUPERFAMILY--SSF81383, at 707580 to 708539 15396 mRNA_7029: 15397 - Hypothetical Protein, at 708796 to 709745 15397 mRNA_7030: 15398 - SUPERFAMILY--SSF50685, at 710305 to 711678 15398

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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708,035 - 15396 mRNA_7028 0.47 -0.8
708,169 + 15396 mRNA_7028 0.61 1.8
708,603 - -0.6
708,637 + 0.7
708,644 + -1.0
708,648 - -0.1
708,648 - 0.0
708,648 - 0.9
708,649 - -1.3
708,666 - -0.2
708,689 + 1.0
708,937 - 15397 mRNA_7029 0.15 0.3
708,989 - 15397 mRNA_7029 0.20 0.6
709,076 - 15397 mRNA_7029 0.29 -1.2
709,076 - 15397 mRNA_7029 0.29 -0.2
709,110 - 15397 mRNA_7029 0.33 -0.0
709,495 - 15397 mRNA_7029 0.74 -1.6
709,657 + 1.1
709,667 - 0.8
709,673 - 0.2
709,676 - 0.1
709,693 + 1.5
709,807 - 1.0
709,834 - 0.1
709,840 - 0.1
709,841 - 0.0
709,867 - 0.6
709,881 + -0.0
709,883 + -1.2
709,970 - 0.2
709,982 + 0.4
709,987 + -0.5