Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7025

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7024: 15392 - K02179 BUB2 cell cycle arrest protein BUB2, at 700234 to 701558 15392 mRNA_7025: 15393 - K13122 FRG1 protein FRG1, at 701812 to 702904 15393 mRNA_7026: 15394 - K12827 SF3A3, SAP61, PRP9 splicing factor 3A subunit 3, at 703087 to 704939 15394

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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700,894 + 15392 mRNA_7024 0.50 2.6
701,057 - 15392 mRNA_7024 0.62 1.1
701,058 + 15392 mRNA_7024 0.62 1.0
701,067 - 15392 mRNA_7024 0.63 1.7
701,190 - 15392 mRNA_7024 0.72 0.1
701,492 - -0.5
701,760 - -0.3
701,760 + 1.1
701,762 + -0.7
701,850 + -0.1
702,019 - 15393 mRNA_7025 0.19 -1.1
702,561 - 15393 mRNA_7025 0.69 -1.8
702,602 - 15393 mRNA_7025 0.72 -0.8
702,633 + 15393 mRNA_7025 0.75 1.8
702,906 - 1.6
702,934 + 1.0
702,953 - 1.2