Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7017

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384 mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683640 to 684233 15385 mRNA_7018: 15386 - Hypothetical Protein, at 684817 to 685871 15386

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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682,648 + 15384 mRNA_7016 0.70 3.7
682,948 + 15384 mRNA_7016 0.81 -0.1
682,978 - 15384 mRNA_7016 0.82 1.9
683,002 + 15384 mRNA_7016 0.82 0.8
683,114 + 15384 mRNA_7016 0.86 -0.5
683,202 + 15384 mRNA_7016 0.89 -0.1
683,241 - 0.2
683,245 + -0.0
683,412 + 0.4
683,549 + 1.1
683,985 - 15385 mRNA_7017 0.58 1.2
683,996 - 15385 mRNA_7017 0.60 0.8
684,100 + 15385 mRNA_7017 0.77 -2.2
684,141 - 15385 mRNA_7017 0.84 -0.8
684,293 + -0.3
684,589 - 1.0
684,598 + -0.3
684,598 + 0.5