Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6997

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6996: 15364 - Hypothetical Protein, at 628009 to 630189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630254 to 632002 15365 mRNA_6998: 15366 - K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase, at 632241 to 635924 15366

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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629,412 - 15364 mRNA_6996 0.64 -1.7
629,710 - 15364 mRNA_6996 0.78 -1.5
629,855 - 15364 mRNA_6996 0.85 1.9
629,872 - 15364 mRNA_6996 0.85 -0.5
629,885 - 15364 mRNA_6996 0.86 1.0
630,289 + -0.6
630,581 - 15365 mRNA_6997 0.19 2.1
630,641 + 15365 mRNA_6997 0.22 0.5
630,709 - 15365 mRNA_6997 0.26 0.3
631,029 + 15365 mRNA_6997 0.44 0.4
631,313 - 15365 mRNA_6997 0.61 1.7
631,347 - 15365 mRNA_6997 0.62 -0.8
631,478 - 15365 mRNA_6997 0.70 -0.4
631,606 + 15365 mRNA_6997 0.77 0.2
631,628 + 15365 mRNA_6997 0.79 1.4
631,762 - 15365 mRNA_6997 0.86 0.1
631,897 + 2.2
632,045 + 1.4
632,046 - 0.4
632,046 - 0.6
632,057 + -0.4
632,058 + 0.0
632,060 + 0.4
632,073 - 0.6
632,076 + 0.9
632,215 + 0.5
632,218 - -0.3
632,230 - 0.1
632,238 + 1.8
632,365 + 0.5
632,372 + 0.5
632,378 + -0.0
632,381 - -1.1
632,389 + 0.6