Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6996

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6995: 15363 - K15323 TSEN34 tRNA-splicing endonuclease subunit Sen34, at 626622 to 627882 15363 mRNA_6996: 15364 - Hypothetical Protein, at 628009 to 630189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630254 to 632002 15365

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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627,940 - 0.9
627,945 - 0.2
627,946 + -0.4
627,948 + 1.3
628,213 + 3.0
628,216 - 0.6
628,257 + 15364 mRNA_6996 0.11 -2.0
628,384 - 15364 mRNA_6996 0.17 -0.5
628,486 + 15364 mRNA_6996 0.22 1.1
628,510 + 15364 mRNA_6996 0.23 -0.6
628,653 - 15364 mRNA_6996 0.30 0.7
628,678 - 15364 mRNA_6996 0.31 0.0
628,689 - 15364 mRNA_6996 0.31 0.7
628,958 + 15364 mRNA_6996 0.44 1.0
629,009 + 15364 mRNA_6996 0.46 -1.6
629,137 + 15364 mRNA_6996 0.52 0.1
629,139 - 15364 mRNA_6996 0.52 1.3
629,248 - 15364 mRNA_6996 0.57 0.7
629,412 - 15364 mRNA_6996 0.64 -1.7
629,710 - 15364 mRNA_6996 0.78 -1.5
629,855 - 15364 mRNA_6996 0.85 1.9
629,872 - 15364 mRNA_6996 0.85 -0.5
629,885 - 15364 mRNA_6996 0.86 1.0
630,289 + -0.6
630,581 - 15365 mRNA_6997 0.19 2.1
630,641 + 15365 mRNA_6997 0.22 0.5
630,709 - 15365 mRNA_6997 0.26 0.3
631,029 + 15365 mRNA_6997 0.44 0.4