Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6984

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6983: 15351 - K02145 ATPeV1A, ATP6A V-type H+-transporting ATPase subunit A, at 596836 to 599468 15351 mRNA_6984: 15352 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 599695 to 602665 15352 mRNA_6985: 15353 - BLAST chitin deacetylase [Moniliophthora roreri MCA 2997], at 602865 to 604394 15353

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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599,491 - -0.0
599,582 + -0.1
599,865 + 0.3
599,883 - 1.8
600,335 + 15352 mRNA_6984 0.22 0.1
601,225 + 15352 mRNA_6984 0.51 -0.1
601,538 + 15352 mRNA_6984 0.62 -1.5
601,793 - 15352 mRNA_6984 0.71 0.1
601,963 + 15352 mRNA_6984 0.76 0.3
601,968 - 15352 mRNA_6984 0.77 -0.1
602,072 - 15352 mRNA_6984 0.80 1.1
602,394 - -0.9
602,499 - -0.3
602,531 - -1.7
602,673 - -0.1
602,674 - 2.3
602,680 + 0.7
602,694 - 0.6
602,694 - 1.7
602,715 - -1.5
602,715 - -1.6
602,716 + 1.6
602,717 - -0.2
602,733 + 0.9
602,750 - -1.0
602,801 - 0.2
602,828 - -1.1
602,857 + 1.1
603,083 + 15353 mRNA_6985 0.14 0.3
603,264 - 15353 mRNA_6985 0.26 -0.1
603,271 - 15353 mRNA_6985 0.27 0.8
603,374 + 15353 mRNA_6985 0.33 0.5
603,421 + 15353 mRNA_6985 0.36 0.3
603,424 + 15353 mRNA_6985 0.37 0.4
603,588 - 15353 mRNA_6985 0.47 1.9
603,591 - 15353 mRNA_6985 0.47 -1.6