Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6981

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6980: 15348 - SUPERFAMILY--SSF51445, at 588631 to 590610 15348 mRNA_6981: 15349 - KOG0613 Projectin/twitchin and related proteins, at 590905 to 593177 15349 mRNA_6982: 15350 - K11497 CENPC centromere protein C, at 593705 to 596436 15350

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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590,182 + 15348 mRNA_6980 0.78 -1.3
590,613 + -1.2
590,636 + -0.3
591,064 + -0.3
591,317 - 15349 mRNA_6981 0.18 0.6
591,375 + 15349 mRNA_6981 0.21 1.6
591,480 + 15349 mRNA_6981 0.25 1.7
591,514 + 15349 mRNA_6981 0.27 1.2
591,614 + 15349 mRNA_6981 0.31 0.6
591,947 - 15349 mRNA_6981 0.46 1.9
592,145 + 15349 mRNA_6981 0.55 -0.0
592,398 + 15349 mRNA_6981 0.66 -0.3
592,523 - 15349 mRNA_6981 0.71 -0.0
592,539 - 15349 mRNA_6981 0.72 1.3
592,765 - 15349 mRNA_6981 0.82 2.4
592,799 - 15349 mRNA_6981 0.83 0.1
592,962 - -0.7
593,056 - 0.3
593,236 - 0.2
593,249 - 2.1
593,267 + 0.8
593,268 + 1.9
593,364 + -0.7
593,394 - 0.3
593,403 - 1.6
593,407 + -0.1
593,469 + -0.3
593,568 + 1.1
593,615 + -0.0
593,625 - 0.7
593,704 + 0.6
593,741 - -0.3