Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6975

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574442 to 577802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578459 to 580488 15343

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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577,638 + -1.7
577,663 - -0.7
577,670 + -1.7
577,803 + 0.7
577,804 - 0.6
577,814 + -1.0
577,933 + 0.3
577,950 - 0.6
577,958 + 0.4
577,962 + 0.8
577,964 + 2.3
577,967 + -0.8
577,977 + -0.4
577,981 - 0.3
577,981 + -1.1
578,087 - -1.5
578,110 + 2.7
578,327 + -0.6
578,418 - 0.8
578,715 + 15343 mRNA_6975 0.13 0.5
579,001 + 15343 mRNA_6975 0.27 -0.1
579,150 - 15343 mRNA_6975 0.34 0.4
579,285 + 15343 mRNA_6975 0.41 0.0
579,565 - 15343 mRNA_6975 0.54 0.5
579,586 - 15343 mRNA_6975 0.56 0.1
579,587 - 15343 mRNA_6975 0.56 -0.5
579,737 - 15343 mRNA_6975 0.63 0.1
580,034 - 15343 mRNA_6975 0.78 1.3
580,045 - 15343 mRNA_6975 0.78 1.2
580,184 + 15343 mRNA_6975 0.85 0.4
580,331 - 0.2
580,333 + -0.4
580,342 + 0.0
580,350 + 1.0
580,350 + -0.6
580,364 - -0.2
580,378 + 0.3
580,490 - 0.4
580,497 + 0.4
580,539 + 1.5
580,641 - 0.3
580,644 + -0.5
580,645 - 0.7
580,647 + -0.0
580,651 + 0.2
580,653 + -1.0
580,664 + 1.6
580,677 - 1.7
580,789 - 0.3
580,790 + 0.7
580,798 - 2.7
580,799 + -1.6
580,799 - -0.2
580,801 + 0.4
580,804 - 1.3
580,808 + 0.2
580,810 - 0.6
580,816 - 0.1
580,816 - -0.6
580,817 - 0.7
580,819 + -0.7
580,823 + 0.6
580,824 + -1.7
580,825 - 0.1
580,828 + -0.1
580,828 + -0.1
580,829 - 1.7
580,829 + -1.6
580,831 + -2.1
580,834 - -0.8
580,835 - 1.9
580,843 - 0.2
580,849 + -0.1
580,849 + -0.3
580,849 + 3.4
580,849 + -1.0
580,851 + 0.3
580,884 + -0.3
580,902 - -0.6
580,909 + -0.2
580,913 - 0.3
580,917 + 0.4
580,920 - 2.5
580,924 + 1.7
580,925 + -0.2
580,928 + 0.7
580,931 + -0.2
580,938 + -1.2
580,939 + -1.3
580,944 + 0.5
580,944 - -1.7
580,952 + -0.2
580,952 - 2.5
580,959 + -0.1
580,987 - 0.2
581,029 + 0.4
581,087 + -0.1
581,089 - 1.1
581,090 - 1.0
581,091 + -0.2
581,096 - 0.9
581,097 + 0.1
581,113 + 1.9
581,129 - 0.8
581,137 + -0.3
581,144 + 0.5
581,224 - 0.7
581,227 - 2.0
581,235 + -1.7
581,243 - -0.5
581,246 - 0.2
581,258 + -0.7
581,262 + -0.2
581,268 + 0.7
581,400 + 1.6
581,412 - 0.6
581,412 - 0.3
581,423 + -1.0
581,475 + -1.3
581,478 + -1.4
581,488 + 1.4