Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6956

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523015 to 527499 15323 mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528007 to 529680 15324 mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529794 to 532653 15325

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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527,203 - -1.0
527,963 + 0.5
528,061 - 0.4
528,092 + 0.6
528,386 - 15324 mRNA_6956 0.23 0.9
528,564 + 15324 mRNA_6956 0.33 0.6
528,824 + 15324 mRNA_6956 0.49 0.9
528,851 + 15324 mRNA_6956 0.50 0.5
528,860 - 15324 mRNA_6956 0.51 -1.0
529,572 + 0.4
529,724 - -0.6
529,727 - 0.4
529,737 + -0.1
529,752 + 0.1