Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6944

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6943: 15311 - SUPERFAMILY--SSF52047, at 493796 to 495109 15311 mRNA_6944: 15312 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 495585 to 496942 15312 mRNA_6945: 15313 - SUPERFAMILY--SSF52047, at 497234 to 499004 15313

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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495,065 - 2.2
495,084 + 1.7
495,198 - 0.2
495,205 + 0.5
495,215 + 1.5
495,623 - 1.2
495,629 - -0.4
495,635 + 0.7
495,636 - 1.7
496,232 - 15312 mRNA_6944 0.48 -0.4
496,680 - 15312 mRNA_6944 0.81 1.9
496,864 - -0.6
496,886 - -0.7
496,974 - -0.1
496,989 - -0.3
497,002 - -2.5
497,148 + 0.3
497,294 - 0.9
497,438 + 15313 mRNA_6945 0.12 1.3
497,449 - 15313 mRNA_6945 0.12 1.2
497,459 + 15313 mRNA_6945 0.13 2.4
497,594 - 15313 mRNA_6945 0.20 0.1
497,597 + 15313 mRNA_6945 0.20 -0.3