Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6938

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306 mRNA_6939: 15307 - K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit, at 480977 to 484798 15307

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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478,050 - 15305 mRNA_6937 0.71 -0.8
478,137 + 15305 mRNA_6937 0.74 -0.6
478,172 + 15305 mRNA_6937 0.75 -0.4
478,337 + 15305 mRNA_6937 0.81 0.7
478,482 + 15305 mRNA_6937 0.87 0.8
478,580 - 1.1
478,930 - 1.0
479,067 - -2.4
480,128 + 15306 mRNA_6938 0.63 -1.0
480,587 + 15306 mRNA_6938 0.88 -0.1
480,694 - 0.4
480,728 + -0.9
480,868 + 0.7
480,872 + -0.3
480,875 + 1.4
480,880 + 0.2
481,155 + 1.5
481,156 - 0.1
481,177 - 0.1
481,219 - 0.5
481,326 + 0.8