Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6937

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473933 to 475521 15304 mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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475,134 - 15304 mRNA_6936 0.76 0.2
475,259 - 15304 mRNA_6936 0.83 2.7
475,532 - 1.1
475,533 + -0.9
475,556 - 0.7
475,587 - -0.8
475,736 + 0.6
475,862 + 1.5
475,869 + 0.3
476,163 + -0.8
476,289 + 0.4
476,560 + 15305 mRNA_6937 0.17 1.8
476,721 - 15305 mRNA_6937 0.22 -0.3
477,079 + 15305 mRNA_6937 0.35 0.6
477,144 - 15305 mRNA_6937 0.38 1.9
477,280 - 15305 mRNA_6937 0.43 2.4
477,735 - 15305 mRNA_6937 0.59 0.3
478,050 - 15305 mRNA_6937 0.71 -0.8
478,137 + 15305 mRNA_6937 0.74 -0.6
478,172 + 15305 mRNA_6937 0.75 -0.4
478,337 + 15305 mRNA_6937 0.81 0.7
478,482 + 15305 mRNA_6937 0.87 0.8
478,580 - 1.1
478,930 - 1.0
479,067 - -2.4