Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6924

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6923: 15291 - Hypothetical Protein, at 439430 to 443984 15291 mRNA_6924: 15292 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 444538 to 446309 15292 mRNA_6925: 15293 - K02331 POL5, MYBBP1A DNA polymerase phi, at 446831 to 450905 15293

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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443,603 - 1.2
443,634 - -0.9
443,757 + -2.2
443,907 - 0.6
443,920 - -0.1
444,077 - -0.1
444,081 - 0.5
444,230 + -0.7
444,243 + -0.5
444,393 - 1.6
444,395 - 0.4
444,400 - 0.7
444,400 - -0.2
444,405 - 0.7
444,418 + -0.6
444,448 + 0.4
444,504 - 1.4
444,505 + 1.6
444,541 + 0.2
444,796 + 15292 mRNA_6924 0.15 0.4
444,797 + 15292 mRNA_6924 0.15 0.4
445,073 - 15292 mRNA_6924 0.30 0.4
445,088 + 15292 mRNA_6924 0.31 -1.5
446,082 - 15292 mRNA_6924 0.87 -1.4
446,095 + 15292 mRNA_6924 0.88 1.0
446,137 - 0.5
446,242 + -0.5
446,244 - -2.2
446,250 + -2.0
446,387 - 2.1
446,390 + -0.5
446,541 - 1.8
446,671 + 0.0
446,707 - 0.7
446,710 + 0.3
446,734 + -1.0
446,864 - -0.3
446,896 - 0.3
447,006 - -0.9