Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6903

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390939 to 393309 15270 mRNA_6903: 15271 - Hypothetical Protein, at 393744 to 394954 15271 mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395182 to 396886 15272

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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392,931 + 15270 mRNA_6902 0.84 -0.0
393,188 - 0.8
393,402 - 0.0
393,490 + 0.2
393,510 - -1.1
393,655 - 0.4
393,811 - 0.7
393,934 + 15271 mRNA_6903 0.16 -2.4
394,192 - 15271 mRNA_6903 0.37 1.0
394,231 - 15271 mRNA_6903 0.40 0.0
394,278 + 15271 mRNA_6903 0.44 -0.4
394,980 - 0.6
395,167 + 0.3
395,438 + 15272 mRNA_6904 0.15 1.2
395,565 - 15272 mRNA_6904 0.22 1.2
395,578 + 15272 mRNA_6904 0.23 1.0