Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6902

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390201 to 390814 15269 mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390939 to 393309 15270 mRNA_6903: 15271 - Hypothetical Protein, at 393744 to 394954 15271

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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390,042 - -0.7
390,132 - 0.4
390,446 - 15269 mRNA_6901 0.40 1.5
390,898 + 3.1
391,043 + 0.8
391,048 - 2.7
391,230 - 15270 mRNA_6902 0.12 -1.5
391,309 - 15270 mRNA_6902 0.16 1.6
391,328 - 15270 mRNA_6902 0.16 2.0
391,484 + 15270 mRNA_6902 0.23 1.3
391,807 + 15270 mRNA_6902 0.37 2.2
392,931 + 15270 mRNA_6902 0.84 -0.0
393,188 - 0.8
393,402 - 0.0
393,490 + 0.2
393,510 - -1.1
393,655 - 0.4
393,811 - 0.7
393,934 + 15271 mRNA_6903 0.16 -2.4
394,192 - 15271 mRNA_6903 0.37 1.0
394,231 - 15271 mRNA_6903 0.40 0.0
394,278 + 15271 mRNA_6903 0.44 -0.4