Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6898

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6897: 15265 - Hypothetical Protein, at 382529 to 383336 15265 mRNA_6898: 15266 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,SUPERFAMILY--SSF52833, at 383747 to 384768 15266 mRNA_6899: 15267 - K01130 E3.1.6.1, aslA arylsulfatase, at 385070 to 387138 15267

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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382,769 - 15265 mRNA_6897 0.30 -0.1
382,954 + 15265 mRNA_6897 0.53 1.2
383,044 + 15265 mRNA_6897 0.64 0.8
383,056 - 15265 mRNA_6897 0.65 0.9
383,080 + 15265 mRNA_6897 0.68 1.4
383,192 - 15265 mRNA_6897 0.82 2.2
383,327 + -0.7
383,332 - 1.6
383,361 - 0.6
383,398 - 2.5
383,508 - 0.9
383,632 - 1.0
383,636 + 0.2
383,644 + -0.5
383,937 + 15266 mRNA_6898 0.19 -0.2
383,951 - 15266 mRNA_6898 0.20 0.6
383,964 - 15266 mRNA_6898 0.21 0.6
384,097 + 15266 mRNA_6898 0.34 -1.1
384,250 + 15266 mRNA_6898 0.49 -1.6
384,255 - 15266 mRNA_6898 0.50 1.2
384,269 + 15266 mRNA_6898 0.51 -0.8
384,838 + 0.6
384,997 + -1.4
385,151 - -0.8
385,300 + 15267 mRNA_6899 0.11 -1.3
385,305 + 15267 mRNA_6899 0.11 0.9
385,557 + 15267 mRNA_6899 0.24 0.5
385,579 + 15267 mRNA_6899 0.25 0.5
385,614 + 15267 mRNA_6899 0.26 2.7