Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6867

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6866: 15234 - Hypothetical Protein, at 309366 to 310327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310458 to 312954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312999 to 313640 15236

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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309,459 - 1.6
309,541 - 15234 mRNA_6866 0.18 -0.5
309,727 + 15234 mRNA_6866 0.38 2.5
309,733 + 15234 mRNA_6866 0.38 -0.1
309,762 + 15234 mRNA_6866 0.41 2.0
309,770 - 15234 mRNA_6866 0.42 0.2
309,868 + 15234 mRNA_6866 0.52 0.1
309,916 + 15234 mRNA_6866 0.57 -0.3
309,916 - 15234 mRNA_6866 0.57 0.2
310,030 + 15234 mRNA_6866 0.69 0.9
310,151 - 15234 mRNA_6866 0.82 0.1
310,158 + 15234 mRNA_6866 0.82 -0.2
310,637 + -0.7
310,785 - 15235 mRNA_6867 0.13 -0.3
311,660 + 15235 mRNA_6867 0.48 1.2
311,661 + 15235 mRNA_6867 0.48 2.1
312,213 - 15235 mRNA_6867 0.70 -1.1
312,271 + 15235 mRNA_6867 0.73 2.9
312,459 - 15235 mRNA_6867 0.80 0.4
312,546 - 15235 mRNA_6867 0.84 0.9
312,571 + 15235 mRNA_6867 0.85 -0.1
312,835 - -0.8
313,092 - 15236 mRNA_6868 0.14 -0.1
313,190 + 15236 mRNA_6868 0.30 1.3
313,195 - 15236 mRNA_6868 0.31 1.0
313,441 + 15236 mRNA_6868 0.69 -0.3
313,458 - 15236 mRNA_6868 0.71 2.6
313,466 + 15236 mRNA_6868 0.73 -0.5
313,563 + 15236 mRNA_6868 0.88 -1.5
313,585 + -0.3
313,702 + 0.1
313,705 - -2.1
313,706 - 2.5
313,710 - 0.0
313,710 + 0.8
313,712 + 0.5
313,731 + 0.6
313,741 + 0.8
313,908 + 3.1