Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6858

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6857: 15225 - Hypothetical Protein, at 292496 to 294098 15225 mRNA_6858: 15226 - SUPERFAMILY--SSF103473, at 295033 to 296248 15226 mRNA_6859: 15227 - K16794 PAFAH1B1, LIS1 platelet-activating factor acetylhydrolase IB subunit alpha, at 297202 to 298993 15227

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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294,097 - 0.7
294,166 + 1.3
294,374 + 0.2
294,742 + 3.2
294,850 + -0.2
294,888 - 1.9
294,894 + 0.2
294,919 + 0.3
295,088 + 0.0
295,120 - 0.0
295,267 - 15226 mRNA_6858 0.19 0.5
295,299 + 15226 mRNA_6858 0.22 0.1
295,403 - 15226 mRNA_6858 0.30 -0.6
295,556 - 15226 mRNA_6858 0.43 0.7
295,588 + 15226 mRNA_6858 0.46 -0.4
296,427 - 0.8
296,428 - -0.3
296,432 + 2.9
296,561 - -0.3
296,687 - 1.3
296,829 - 1.1
296,855 - 0.6
296,870 - 1.9
296,881 - 2.0
296,889 - 0.2
296,889 + 0.2
296,889 + 1.1
296,891 - 1.1
296,898 + 1.1
297,034 - -0.5