Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6852

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6852: 15220 - KOG1337 N-methyltransferase, at 277485 to 279463 15220 mRNA_6853: 15221 - Interpro Altered inheritance of mitochondria 5, at 279894 to 280567 15221

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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276,506 - 0.6
276,515 + -0.7
276,525 - -0.5
276,615 - -0.9
276,639 - 0.7
276,952 + -0.5
277,098 + -0.8
277,105 + -0.1
277,112 + 0.2
277,121 - -1.4
277,267 - 0.8
277,404 + -0.2
277,447 + -0.1
277,447 + 2.0
277,579 - -0.2
277,735 - 15220 mRNA_6852 0.13 0.9
277,743 - 15220 mRNA_6852 0.13 1.2
278,006 + 15220 mRNA_6852 0.26 -0.2
278,388 + 15220 mRNA_6852 0.46 -0.0
278,391 - 15220 mRNA_6852 0.46 2.3
279,322 + 1.7
279,323 - -0.9
279,460 + 1.4
279,629 - 1.5
279,750 - 1.7
280,076 + 15221 mRNA_6853 0.27 0.1
280,083 - 15221 mRNA_6853 0.28 2.0
280,325 - 15221 mRNA_6853 0.64 0.8
280,326 - 15221 mRNA_6853 0.64 1.9
280,328 - 15221 mRNA_6853 0.64 0.7
280,344 + 15221 mRNA_6853 0.67 0.6
280,433 - 15221 mRNA_6853 0.80 -1.6